Darvin: It's a known engine bug in NWN1 that some of the properties of the main hand weapon are erroneously imposed on the off-hand weapon. I can't remember for sure if energy damage type is one of the things that gets transposed, but that would explain what you're seeing.
Warutteri: OK, that explains some things but this is happening in NWN2 and is driving me crazy since I made 2 swords with 2 different typed of elemental damage to cut trough any elemental resistances and/or immunities and now only my main hand elemental damages are affecting the enemies... I've been thinking of adding some special effects like "silence", "sleep) or "blind" but I don't want to waste the essences if those don't work either... Any advise from people who have experience in this?
Out of curiosity, I hopped into NWN2, and the magic damage of my character's off-hand weapon was occurring fairly regularly.
Have you literally been seeing only 100% main-hand damage effect, or does the off-hand damage effect show up sometimes? If that's the case, it might just be that you're not hitting very often with your off-hand, maybe from attack penalty, or the fact that you can only swing an off-hand once per round, (without extra feats). I'm just throwing guesses out.
A glitch wouldn't surprise me, either, as I've seen NWN2 do silly things before.