Unfortunately i didn't kept my saved games after finishing RealMyst the last time i played it, so i can't check that one for myself right now, but i don't see how/why anything would've been removed from gog's version.
Anyway,
here's a page covering most if not all of RealMyst easter eggs. Some spoilers in there, obviously.
Also, Huevo and Vika in more detail [url=http://home.comcast.net/~zardoz99/RealMyst/huevo_and_vika_cracked.htm]here[/url] if you want to check it out.
Edit:
eh ,eh, i had totally forgot that you can go straight to Rime after a quick stop by K'veer so no need for savegames ;)
I didn't played with the crystals long enough, but there is in fact something there, although i'm not quite sure what it is.
Edit2:
Ok, i just figured out what it is and why i wasn't remembering it as an easter egg. It's not an easter egg at all ;)
That bit is explained in Atrus' Rime Journal, except on his journal you can't make out the last crystal cause it's smudged, so you have to get that last crystal shape by trial and error. Basically you can do the same thing Atrus' did while we was experimenting with the imager and crystals when he was on Rime with Sirrus. And the Age in question is just 'an Age', nothing more specific than that.
I uploaded a video to you tube where you can see the whole thing. It's
here.
This is with gog's version btw, so nothing is missing ;)