According to the official strategy guide there was originally an alternate ending to Ellen's scenario where the player can leave the pyramid after learning that AM's original components no longer exist instead of finding and using the Chaos Trebler. I suspect it would have worked similar to Nimdok's scenario (which has a "best" ending with a white background but also several "good" endings with a lower spiritual barometer result) But the game is bugged so the alternate endings aren't operational in Ellen's scenario, which I guess accounts for the inability to fill her spiritual barometer.
As others have said, though, it has no impact on the endgame.
Post edited May 30, 2020 by Shantih1