Enebias: The fluctuation is FAR higher for me. Sometimes it shows nearly 100 more than I actually have. No clue why this happens either.
Timboli: Well that is weird, and I have certainly never seen anything like that.
Are you the only one on your PC that logs onto GOG or has an account at GOG?
Have you gotten GOG games from elsewhere maybe? I only have the one via Humble,
Seven: Enhanced Edition, which every time I use the 'refresh' option or GOG changes something, gets sorted to the top of my library. Might especially have an impact if you have gotten GOG based DLC elsewhere.
Then again, if you use Galaxy, might be related to that, especially if you have imported games from other stores.
I'm the only one using GOG, and the only games I didn't get from GOG directly were those few games free with Amazon prime. The weird numbers started showing up much earlier though.