I agree. Anyone worrying about console inspired "innovations" seeping in to a PC game is just proving to be sane. We have countless examples that have happened before (and the cries of reassurance that it would absolutely, utterly and unequivocally would not happen that preceded each and every case), that not stating concern would be simply moronic.
I'd still be hopeful though for two reasons.
First we are talking about Larian here and, putting it simply, they are different than most of the game dev studios, at least of a relevant size. Only tiny indie studios have similar attitude and directness.
Secondly the PC controls are already in the game. It's doubtful that anyone would change something that works too drastically in an already established product.
Truth be told though the second point does not stand for any future games Larian makes, so it remains to be seen what the future holds. Personally I'm more concerned about that, than D:OS EE getting screwed.
So, until proved guilty of consolitis, in Larian we trust! :P