I probably just ran into the same thing. The game starts up just fine, but when the language selection comes up, it just constantly keeps changing among all the options, and if you blindly pick one and get to the main menu, only the down key works (not up), and I wasn't able to navigate through the settings window at all.
Poking through the logs a bit (~/.config/unity3d/Stegosoft Games/Ara Fell/Player.log) I found a number of errors like so:
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so.0
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so.0.so
Fallback handler could not load library ~/gog-linux/Ara Fell/game/Ara Fell_Data/Mono/libudev.so.0
Plugins: Couldn't open libudev, error: libudev: cannot open shared object file: No such file or directory
That was a significant tip off. I installed sys-libs/libudev-compat (Gentoo - YMMV), which provides libudev.so.0, and the second half of that error block goes away and the keyboard starts working in Ara Fell.
Hope that helps someone else!